PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925806.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 403aa MW: 46571.2 Da PI: 8.5946

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925806.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.9	7.5e-11	281	328	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++++G+g+W++I r++ +Rt+ +++++w+++l XP_022925806.1 281 WTLTEVMRLVDGIAEYGTGRWTRIKRHLFassPHRTPIDLRDKWRNLL 328 **************************99**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MDQEVHFCQK FTNMNYHWVK MEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR 60 DFGYEIQTNG DAEVDENSFR QNRGLQLGKP SSESKSQGSS RSDTDAFEIS ELSATMVMEA 120 EFNNTPVERS LTRELFSGLR TRGGCATPFE GNICDTILDN NNIHKFNTNE NYLENEKISD 180 ENVKGDIVAS KLASCSRERR LRKPTRRYIE EFADSKSENN KGRRKPPTKD KYLKVTSTEE 240 SNHIRQGFLS EDEPSATECK NVYSSAKICK KYDRRKHQKM WTLTEVMRLV DGIAEYGTGR 300 WTRIKRHLFA SSPHRTPIDL RDKWRNLLKA SCVNIQNSKG TECKQPHASR PLPKSLLQRV 360 YELANIYPYP KERSPKPVRE ATPPMYLIES NSLSFNWGRK KYE

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MDQEVHFCQK FTNMNYHWVK MEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR  60
DFGYEIQTNG DAEVDENSFR QNRGLQLGKP SSESKSQGSS RSDTDAFEIS ELSATMVMEA  120
EFNNTPVERS LTRELFSGLR TRGGCATPFE GNICDTILDN NNIHKFNTNE NYLENEKISD  180
ENVKGDIVAS KLASCSRERR LRKPTRRYIE EFADSKSENN KGRRKPPTKD KYLKVTSTEE  240
SNHIRQGFLS EDEPSATECK NVYSSAKICK KYDRRKHQKM WTLTEVMRLV DGIAEYGTGR  300
WTRIKRHLFA SSPHRTPIDL RDKWRNLLKA SCVNIQNSKG TECKQPHASR PLPKSLLQRV  360
YELANIYPYP KERSPKPVRE ATPPMYLIES NSLSFNWGRK KYE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	198	204	ERRLRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	2e-24	MYB_related family protein