PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022925809.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 198aa    MW: 23025.1 Da    PI: 7.6688
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022925809.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind97.41.4e-30161292102
                     HHHHHHHHHCTG......................GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT CS
    HSF_DNA-bind   2 Flkklyeilede......................elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks 74 
                     Fl+k+y++l+++                        ++++sw+++g+ f+v+ + +f++ +LpkyFkh+nf+SF+RQLn+YgFkk++ ++     
  XP_022925809.1  16 FLSKTYDLLQEAgsfhfkaadeedeedeedeengGGNRIVSWNADGSGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKR----- 105
                     88889999985555555555556666666666667899************************************************9998..... PP

                     XTTSEEEEESXXXXXXXXXXXXXXXXXX CS
    HSF_DNA-bind  75 kekiweFkhksFkkgkkellekikrkks 102
                         weFkh++F++g++++l +i rkk 
  XP_022925809.1 106 ----WEFKHEKFQRGNRRMLVEIVRKKC 129
                     ....*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MSLIMQSSRI RNPAPFLSKT YDLLQEAGSF HFKAADEEDE EDEEDEENGG GNRIVSWNAD  60
GSGFIVWSPA DFSEVLLPKY FKHNNFSSFI RQLNTYGFKK TSPKRWEFKH EKFQRGNRRM  120
LVEIVRKKCE PSVFPAYLRS SHEGAATMAV DQENGDHLLL MEENKNLRRQ KLELQAQIAQ  180
FKALHIRLLD CVGRRIEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-40HSF family protein