PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022925839.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 273aa    MW: 30483 Da    PI: 6.3774
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022925839.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19118168255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  XP_022925839.1 118 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFKTAEEAALAYDKAALRIRG 168
                     8********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGIQQDQSEA ILENVWANFI GQSGLDGQGG KKSGKSWTEL PSLRYRDGSM EGVLERLPSL  60
GRWVSMGDEA WEELLDGVVP VSNAEKCFNE NLENTPFSNS GFDVDRRRSG KTVATTKHYR  120
GVRRRPWGKY AAEIRDSSRK GARVWLGTFK TAEEAALAYD KAALRIRGPK AHLNFPVQTV  180
AEARGMHLST KNDHLDNPMP SSYSSLGSHG SVSITGKRST RDWEDNLNFS IMELEQPTPK  240
RKSSTNNMLF DDLDVFEFQD LGSDYLDSLL SSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.13e-33ERF family protein