PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925866.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 226aa MW: 26376.7 Da PI: 8.8314

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925866.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.4	8e-21	64	118	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++t+++++qle Le+ F+++ +++ +++ +L+k+lgL+ rq+ +WFqNrRa++k XP_022925866.1 64 KTKTKLSPDQLESLERRFQEEVKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWK 118 899***************************************************9 PP
2	HD-ZIP_I/II	109.7	2.1e-35	65	152	2	89
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 k +ls +q+++LE+ F+ee kL+p+rK++l++eLglqprq+a+WFqnrRAR+ktkql + y++Lk+++d++++++++L+++v +L++ XP_022925866.1 65 TKTKLSPDQLESLERRFQEEVKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWKTKQLQHLYDTLKQEFDTISNQKHTLQQQVMKLKT 152 589***********************************************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MEWNNGSLNP KLLSPPLLHH QSSYTPCYNY NYTYNLDHFP VLERKNPAEE SVVGGVDQKK 60 NKNKTKTKLS PDQLESLERR FQEEVKLDPD RKMKLSKELG LQPRQIAIWF QNRRARWKTK 120 QLQHLYDTLK QEFDTISNQK HTLQQQVMKL KTILLLREEA TRNHQGSMAY TDEETVESTS 180 VGVRSSTNNY MYNNKVEDLV EISGSGPPPP PFWWGAEEDA PRPSYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	121	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	1e-38	HD-ZIP family protein