PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925867.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 447aa MW: 49748.6 Da PI: 6.9616

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925867.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.7e-32	244	299	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_022925867.1 244 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 299 68****************************************************97 PP
2	Myb_DNA-binding	40.4	6.6e-13	246	297	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_022925867.1 246 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 297 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MASTQLSLEC QVQSYSMLLQ YSFGDQHQVA PNSHDFYYKL QEFVSRLEQE RLKIDVFKRE 60 LPLCMQLLTN AVETSRRQLQ ACKAMEAPPS KPVLEEFMPL KNSTTVDDEK PPAILSDKAN 120 WMTSLQLWSQ ANKEYTDPPH SHNNNDNSDT PKQRVSNGAF VPFDKDRNLE PGLGVGGSGV 180 NGVAAEMELL EKGEKEEKKN HCGDTNNSVD GGIVTATEDR TERGAGEVGL APTMSSTTTQ 240 THRKARRCWS PDLHRRFVNA LQMLGGSQVA TPKQIRELMK VDGLTNDEVK SHLQKYRLHT 300 VRRPGLAPQA SGSPAAQLVV LGLGGLWVPP EYARSPTLYG PPATSHPPSH LYTPASVPQE 360 YYTRTIAPPH LQQHHHQVHL YKGEPTKAAQ ISPASEVRDT AERSESLEEE KSEGGQNGEN 420 RRIIGRGSWG RRLEGEESNR SEVSLKF

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MASTQLSLEC QVQSYSMLLQ YSFGDQHQVA PNSHDFYYKL QEFVSRLEQE RLKIDVFKRE  60
LPLCMQLLTN AVETSRRQLQ ACKAMEAPPS KPVLEEFMPL KNSTTVDDEK PPAILSDKAN  120
WMTSLQLWSQ ANKEYTDPPH SHNNNDNSDT PKQRVSNGAF VPFDKDRNLE PGLGVGGSGV  180
NGVAAEMELL EKGEKEEKKN HCGDTNNSVD GGIVTATEDR TERGAGEVGL APTMSSTTTQ  240
THRKARRCWS PDLHRRFVNA LQMLGGSQVA TPKQIRELMK VDGLTNDEVK SHLQKYRLHT  300
VRRPGLAPQA SGSPAAQLVV LGLGGLWVPP EYARSPTLYG PPATSHPPSH LYTPASVPQE  360
YYTRTIAPPH LQQHHHQVHL YKGEPTKAAQ ISPASEVRDT AERSESLEEE KSEGGQNGEN  420
RRIIGRGSWG RRLEGEESNR SEVSLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	7e-86	G2-like family protein