PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925956.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1764aa MW: 199841 Da PI: 4.7704

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925956.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.5	5.3e-19	31	86	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps+++r+eL++klgLt+rq ++WF+ rR k+kk XP_022925956.1 31 PKRQMKTPFQLETLEKAYALDTYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKK 86 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1764 aa Download sequence
MEAAASDGEN HNHNNDDINK ISNSREGLSK PKRQMKTPFQ LETLEKAYAL DTYPSESTRA 60 ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRKVMAPAL PDSPIDELRV VAEPGSDYAS 120 GSGSGSSPFG DVGLRNVVPR SVGDDMPMMR RYYEPSRSVM ELRAIACVES QLGEPLREDG 180 PILGIEFDSL PPDAFGAPIV AEQQKRSGHS YGEKYEQRDA KSNKVTARGF TEYPFMPDQS 240 NIRADAYGPV AQPHYPDSLV EVTAARTPYL LGHEQPNRSH NYHGQVSRVR LLSQQEKQAV 300 TIPSPAEDST CVPPRDSFAS IRMNSQFTEH PIVGQENYVL ADGHVFPEDV MIRMERKRKS 360 EEARLNKEAE AHEIKMRKEL EKQDILRKKS EERMRREMEK QDRERRREEE KLLREKQREE 420 ERLKREERRE HERKEKFLQR EYLRAEKRRQ KEAIRKEKEA VRRQAAIEKA TARRIARESM 480 ELIEDEQLEL MELAAANKGF SSILSLDHDT LQNLESFQDY LGAFPPKSVQ LKKPFGIQPW 540 INSEENIGNL LMVWRFFITF SDVLELWPFT LDEFVQALHD YDSRLLGEIH ICLLSLIVKD 600 IEDVARTPSA GLGINQNGVA NSGGGHPQIV EGAYAWGFDI CNWQKHLNPL TWPEIFRQLA 660 LSAGFGPQLK KRGLAWSEMR SNDEAKCGED VVSTLRNGSA AENAFAIMQE KGLLAPRRSR 720 HRLTPGTVKF AAFHVLSLEG SEGLTVLELA EKIQRSGLRD LSTSKTPEAS ISVALTRDTK 780 LFERIAPSTY RVRAPYRKDP DDAEEILSVA RKKIQVFQNG FLVGEDADDV ERDEESECDD 840 VDEDPEVDDM ATTALVNEDV SKGDADLGVD NENVCHDIAG NLQNAVAKDI PSFPLSGSKD 900 TKYLNIPTEQ YAAIDETNIS DLDQDNMEID ESKEGASWIQ GLTEGEYHDL SVEERLNALI 960 ALTSIANEGN SIRLVLEDRL EAANAVKKQM LAEAQIDKSR LKEEIITKSD FPIHIVSKVE 1020 TEHNGSAMEG GQSPFPVTEK KNDETTPSTV ENLGNVSNER ATLVPDLFPG SDNFLAQQCG 1080 HASKRSRSQL KSYIAHKAEE MYTYRSLPLG RDRRHNRYWQ FVASSSSNDP GSGRIFVEMY 1140 DGKWRLIDSE EDFDALSMAL DTRGVRESHL RIMLQMIETS FKENVRRSLQ CGNVMVQSGI 1200 APKHENYELS FSPDCNTGFN SPGSTVCGLN LDTVVTSSSF RIELGRNEIE KNAAFRRYQD 1260 LQRWMLRECF STSTLCAMKF GEKRCISLLD ICGSCLCLFE SQNSHCPSCH QTFGTSENDI 1320 NFLEHKRHCE MERMSNPLDV HMLDASLPLK SRLLKALLAF IEVHVPLEAF QSFWTEHRKD 1380 WGVRMKLSPS IEELLQILTL FESAVKRDFL KSDFTTTDEH LGSCSVSGTV TSDIGSVPTL 1440 PWIPRTSAAV ALRLCEVDAS IYYIGCEKPE PDQDKEVGEH INFSNRYVQV KNEERTKLND 1500 LDYDDLMKND NSANPKGFRT SYKRSRGSRD YGRRKKWQKK VNGSRSGQVR QNVKSNEKMN 1560 QGQRELGQGT QVMGIRGRRT VRKRRAEKSI PDEGLLGLMP SSSAHNIDES PKDYLGEWED 1620 EKMDRFMDME DEEENVMEDK ENVMEDEENE ENEENVNNNV EAMESEEDGQ GVVGYEEGGW 1680 EFGFEGTSNS NRWNNGDLEM GSDEDADLSE DYNGTEEGGN DDIEEELDVD DTSEESDCSP 1740 NRRRIVGNNN GGAESAVSDD DYSD

Sequence ? help Back to Top

Protein Sequence Length: 1764 aa Download sequence

MEAAASDGEN HNHNNDDINK ISNSREGLSK PKRQMKTPFQ LETLEKAYAL DTYPSESTRA  60
ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRKVMAPAL PDSPIDELRV VAEPGSDYAS  120
GSGSGSSPFG DVGLRNVVPR SVGDDMPMMR RYYEPSRSVM ELRAIACVES QLGEPLREDG  180
PILGIEFDSL PPDAFGAPIV AEQQKRSGHS YGEKYEQRDA KSNKVTARGF TEYPFMPDQS  240
NIRADAYGPV AQPHYPDSLV EVTAARTPYL LGHEQPNRSH NYHGQVSRVR LLSQQEKQAV  300
TIPSPAEDST CVPPRDSFAS IRMNSQFTEH PIVGQENYVL ADGHVFPEDV MIRMERKRKS  360
EEARLNKEAE AHEIKMRKEL EKQDILRKKS EERMRREMEK QDRERRREEE KLLREKQREE  420
ERLKREERRE HERKEKFLQR EYLRAEKRRQ KEAIRKEKEA VRRQAAIEKA TARRIARESM  480
ELIEDEQLEL MELAAANKGF SSILSLDHDT LQNLESFQDY LGAFPPKSVQ LKKPFGIQPW  540
INSEENIGNL LMVWRFFITF SDVLELWPFT LDEFVQALHD YDSRLLGEIH ICLLSLIVKD  600
IEDVARTPSA GLGINQNGVA NSGGGHPQIV EGAYAWGFDI CNWQKHLNPL TWPEIFRQLA  660
LSAGFGPQLK KRGLAWSEMR SNDEAKCGED VVSTLRNGSA AENAFAIMQE KGLLAPRRSR  720
HRLTPGTVKF AAFHVLSLEG SEGLTVLELA EKIQRSGLRD LSTSKTPEAS ISVALTRDTK  780
LFERIAPSTY RVRAPYRKDP DDAEEILSVA RKKIQVFQNG FLVGEDADDV ERDEESECDD  840
VDEDPEVDDM ATTALVNEDV SKGDADLGVD NENVCHDIAG NLQNAVAKDI PSFPLSGSKD  900
TKYLNIPTEQ YAAIDETNIS DLDQDNMEID ESKEGASWIQ GLTEGEYHDL SVEERLNALI  960
ALTSIANEGN SIRLVLEDRL EAANAVKKQM LAEAQIDKSR LKEEIITKSD FPIHIVSKVE  1020
TEHNGSAMEG GQSPFPVTEK KNDETTPSTV ENLGNVSNER ATLVPDLFPG SDNFLAQQCG  1080
HASKRSRSQL KSYIAHKAEE MYTYRSLPLG RDRRHNRYWQ FVASSSSNDP GSGRIFVEMY  1140
DGKWRLIDSE EDFDALSMAL DTRGVRESHL RIMLQMIETS FKENVRRSLQ CGNVMVQSGI  1200
APKHENYELS FSPDCNTGFN SPGSTVCGLN LDTVVTSSSF RIELGRNEIE KNAAFRRYQD  1260
LQRWMLRECF STSTLCAMKF GEKRCISLLD ICGSCLCLFE SQNSHCPSCH QTFGTSENDI  1320
NFLEHKRHCE MERMSNPLDV HMLDASLPLK SRLLKALLAF IEVHVPLEAF QSFWTEHRKD  1380
WGVRMKLSPS IEELLQILTL FESAVKRDFL KSDFTTTDEH LGSCSVSGTV TSDIGSVPTL  1440
PWIPRTSAAV ALRLCEVDAS IYYIGCEKPE PDQDKEVGEH INFSNRYVQV KNEERTKLND  1500
LDYDDLMKND NSANPKGFRT SYKRSRGSRD YGRRKKWQKK VNGSRSGQVR QNVKSNEKMN  1560
QGQRELGQGT QVMGIRGRRT VRKRRAEKSI PDEGLLGLMP SSSAHNIDES PKDYLGEWED  1620
EKMDRFMDME DEEENVMEDK ENVMEDEENE ENEENVNNNV EAMESEEDGQ GVVGYEEGGW  1680
EFGFEGTSNS NRWNNGDLEM GSDEDADLSE DYNGTEEGGN DDIEEELDVD DTSEESDCSP  1740
NRRRIVGNNN GGAESAVSDD DYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	87	RRLKDKKE
2	448	464	RRQKEAIRKEKEAVRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein