PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925980.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 453aa MW: 50404.9 Da PI: 6.3796

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925980.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.8	4.8e-19	193	290	3	98
EE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 k l++sdv+++gr+vlpk+ aee+ +e+++++++ s+++W +k++y +++s++yvl+ ++ +Fv++ngLk gD ++++ +++++ XP_022925980.1 193 KDLKNSDVGSLGRIVLPKREAEENlpllT--DKEGIQIVMREvHSNKKWAMKYKYwaNNRSRMYVLE-NTGDFVRQNGLKIGDLMTLY--EDECK 282 7899********************653..447789999995666****9877888889999.******************..66999 PP ..EEEEE- CS B3 91 elvvkvfr 98 +++v v++ XP_022925980.1 283 NMYVAVVK 290 99998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MDDDNHHYDL PPLSSATLSA ATILLSHPPP PPQDSHLPPI LSQHCLGFSS PAPKSYFFTN 60 PPPPPPPPPP PHDQPPSHFP PSSAFLSYGF NDLSTSLFQK DEGRRVLDAW STKVARSKRR 120 LARQRTLTLS RTSSSSSSTS AASSSGFGYN NDEYSKGLMA THFLNTDTHN NANPNNFTLC 180 TPDNKILRML LKKDLKNSDV GSLGRIVLPK REAEENLPLL TDKEGIQIVM REVHSNKKWA 240 MKYKYWANNR SRMYVLENTG DFVRQNGLKI GDLMTLYEDE CKNMYVAVVK GENDSREENE 300 ELVRNNKNNN NKNNQQCSFT NMCIKDEEED ASLAMLIEEL KHKPEDEDRP LSCSSSTSSS 360 SNSSHNNNNN ALMASDSYLS TTPQPSSSDM MGAAAKGIYN SINNNKKKNG NKEGGEDLQA 420 GNGLEDCFRG LDTLPEVSGF KFPLFDYLSN DRT

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MDDDNHHYDL PPLSSATLSA ATILLSHPPP PPQDSHLPPI LSQHCLGFSS PAPKSYFFTN  60
PPPPPPPPPP PHDQPPSHFP PSSAFLSYGF NDLSTSLFQK DEGRRVLDAW STKVARSKRR  120
LARQRTLTLS RTSSSSSSTS AASSSGFGYN NDEYSKGLMA THFLNTDTHN NANPNNFTLC  180
TPDNKILRML LKKDLKNSDV GSLGRIVLPK REAEENLPLL TDKEGIQIVM REVHSNKKWA  240
MKYKYWANNR SRMYVLENTG DFVRQNGLKI GDLMTLYEDE CKNMYVAVVK GENDSREENE  300
ELVRNNKNNN NKNNQQCSFT NMCIKDEEED ASLAMLIEEL KHKPEDEDRP LSCSSSTSSS  360
SNSSHNNNNN ALMASDSYLS TTPQPSSSDM MGAAAKGIYN SINNNKKKNG NKEGGEDLQA  420
GNGLEDCFRG LDTLPEVSGF KFPLFDYLSN DRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	2e-49	B3 family protein