PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926023.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bZIP

Protein Properties

Length: 367aa MW: 39843.4 Da PI: 8.2684

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926023.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.3	5.4e-16	187	241	4	58
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 kr rr+ +NRe+ArrsR+RK+a + eLe+ v+eL eN+aL k+ + +++++ + XP_022926023.1 187 AKRVRRMLSNRESARRSRKRKQAHLTELETQVAELRVENSALLKRFNDISQKYNE 241 699********************************************99999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MRSMDRVFSV DGIADQFLSS PPRAVPTEPE ESSKLNRSAS EWSFRRFLQE ASVSDSSTSP 60 PPPPASPSPD DRSENKESGE NANQILQKQS NRNEICSSSS ATSRTEKSKA AESVEIGPPC 120 VPSDSGDYQA FLKSKLNLAC AAVALCRVGI LGGTATISSS IEQTTDEEDD VVEGEDGTSE 180 RKDPAYAKRV RRMLSNRESA RRSRKRKQAH LTELETQVAE LRVENSALLK RFNDISQKYN 240 ESAVNNRVLK ADLETLKAKV QMAEETVKRI TGSKPMFYGM SSEVLSMSMQ SFDGSPSKTS 300 RDAASNHAAD ISSADTQLNC VAKAATVSGK TMVKTGSLRR VASLERLQKR IRGSSGCCEP 360 SGKGDQL

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MRSMDRVFSV DGIADQFLSS PPRAVPTEPE ESSKLNRSAS EWSFRRFLQE ASVSDSSTSP  60
PPPPASPSPD DRSENKESGE NANQILQKQS NRNEICSSSS ATSRTEKSKA AESVEIGPPC  120
VPSDSGDYQA FLKSKLNLAC AAVALCRVGI LGGTATISSS IEQTTDEEDD VVEGEDGTSE  180
RKDPAYAKRV RRMLSNRESA RRSRKRKQAH LTELETQVAE LRVENSALLK RFNDISQKYN  240
ESAVNNRVLK ADLETLKAKV QMAEETVKRI TGSKPMFYGM SSEVLSMSMQ SFDGSPSKTS  300
RDAASNHAAD ISSADTQLNC VAKAATVSGK TMVKTGSLRR VASLERLQKR IRGSSGCCEP  360
SGKGDQL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	201	207	RRSRKRK
2	201	208	RRSRKRKQ
3	203	208	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	6e-54	bZIP family protein