PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926042.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 842aa    MW: 92160.3 Da    PI: 5.8545
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926042.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.31.3e-181371357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022926042.1 13 KYVRYTPEQVEALERVYAECPKPSSLKRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 71
                    6789*****************************************************97 PP
2START1641.1e-511613692205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++   ++ vi +g  g+++l+
  XP_022926042.1 161 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRLSWYRDCRCLNVVSVIPTGngGTIELI 254
                     68999*****************************************************.8999999999************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf++ Ry+ +l++g+ v++++S++s +  p     s +vRae+lpSg+li+ +++ +s +++v+h+dl+ ++++++lr+l+
  XP_022926042.1 255 YMQTYAPTTLAAaRDFWTMRYTTSLEDGSVVVCERSLTSSTGGPAgppPSTFVRAEMLPSGYLIRACEGDGSIIHIVDHIDLDVWSVPEVLRPLY 349
                     ***************************************999988887899******************************************** PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+ + ++k+++a+l++ ++
  XP_022926042.1 350 ESSKILAQKMTTAALRHVRQ 369
                     ***************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 842 aa     Download sequence    
MALLMHKDMG SSKYVRYTPE QVEALERVYA ECPKPSSLKR QQLIRECPIL SNIEPKQIKV  60
WFQNRRCREK QRKESSRLQS VNRKLSAMNK LLMEENDRLQ KQVSHLVYEN GYVRQKLSAS  120
GTTTDNSCES VVMSGQPQQQ QNPNPQHPNR DVNNPAGLLA IAEETLAEFL SKATGTAVDW  180
VQMIGMKPGP DSIGIVAVSR NCSGVAARAC GLVSLEPTKV AEILKDRLSW YRDCRCLNVV  240
SVIPTGNGGT IELIYMQTYA PTTLAAARDF WTMRYTTSLE DGSVVVCERS LTSSTGGPAG  300
PPPSTFVRAE MLPSGYLIRA CEGDGSIIHI VDHIDLDVWS VPEVLRPLYE SSKILAQKMT  360
TAALRHVRQI AQETNGEIQY TGGRQPAVLR TFSQKLCRGF NDAVNGFADD GWSPMGSDGL  420
EDVTIVINSS ANVFPGSQYN TSMYPSFGGG VMCAKASMLL QDVPPALLVR FLREHRSEWA  480
DYGVDAYCAA SLKASPYAVP CARPGGFPSS QVILPLASTV EREEFLEVVR LEGLAFSPDD  540
VALAGRDMYL LQLCSGVDEN AVGACAQLVF APIDESFADD APLLPSGFRV IPLDPKTDDP  600
TAARTLDLAS TLEVGANAAR SAGQTDLSSY NLRSVLTIAF QFTFENHLQE NVAAMARQYV  660
RSVVGSVQRV AMAIAPSRLS SNMGLKPLPG SPEALTLARW ICRSYRIHVG SELLQADSQP  720
GGDAMLKLLW HHSDAIMCCS VKTNASAVFT FANQAGLDML ETTLVGLQDI MLDKILDEAG  780
RKILCTEFPK IMQQGFTNLP SGICISSMGR PISYEQAIAW KVLNDDDSNH CLAFMFINWS  840
FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein