PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926168.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 250aa MW: 28850.7 Da PI: 8.9714

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926168.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	138.8	3.4e-43	5	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lppGfrF Pt+eelv++yL +k++g + ++++i+ ++iy ++PwdLp+ +k +e++w+fF++r++++a+g r++r+t++gyWkatg XP_022926168.1 5 LPPGFRFYPTEEELVSFYLFHKLQGGTqdliRAVDQTIPLLNIYLFNPWDLPQfageVCKRDEEQWFFFIPRQESEARGGRPKRVTANGYWKATG 99 79*********************9977743344469999*******657765566888*************************** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + v+s+ +++ +g+k+++vfy+grapkg+kt+W m+ey+l XP_022926168.1 100 SPTYVYSSnTHRSIGVKRSMVFYNGRAPKGTKTQWKMNEYKL 141 **9866778*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MADSLPPGFR FYPTEEELVS FYLFHKLQGG TQDLIRAVDQ TIPLLNIYLF NPWDLPQFAG 60 EVCKRDEEQW FFFIPRQESE ARGGRPKRVT ANGYWKATGS PTYVYSSNTH RSIGVKRSMV 120 FYNGRAPKGT KTQWKMNEYK LIGYPKLSLC RIYKKSKSLR AFDRRPQPPP LEAPIPPKQC 180 LETQHNAGDQ FADDQKLPNP PLTVERASSP ESFSSGDGHG EAATTNYNMQ LKMEVDNYEL 240 VWDWSRLNWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	5e-64	NAC family protein