PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926194.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 459aa MW: 52397.1 Da PI: 7.7182

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926194.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	83.2	3.4e-26	49	134	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+laL+++r++m+ +r++ lk+plW+e+s+k+ e gf+r+pk+Ckek+en+ k++k++k g+ +++++s++ +++ d+le XP_022926194.1 49 RWPRQETLALLKIRSDMDAIFRDATLKAPLWDEISRKLGELGFNRTPKKCKEKFENVYKYHKRTKIGRCGKSDNSKKVYKFSDELE 134 8********************************************************************99988888899988887 PP
2	trihelix	100.1	1.8e-31	311	395	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev aLi++r eme +++++ +k+ lWee+s mr g++rs+k+Ckekwen+nk++kk+k+g+kkr e+s+tcpyf+ l+ XP_022926194.1 311 RWPKAEVEALIRLRMEMEMKYEENGQKGLLWEEISGGMRGIGYNRSSKRCKEKWENINKYFKKVKDGKKKR-GEDSKTCPYFHLLD 395 8*******************************************************************8.89999****998 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MDVVDSGVAV APPPEAVEPN EVGGGSNSGE EDKGLMLFED GEKNFGGNRW PRQETLALLK 60 IRSDMDAIFR DATLKAPLWD EISRKLGELG FNRTPKKCKE KFENVYKYHK RTKIGRCGKS 120 DNSKKVYKFS DELEAFDIHH HNHISVQSHH RHSIPPPKLI APSTVSSTID NSLPLNFQNI 180 SANGLFLSST SSSTASEEDK DTFRKTKKRK WRDFFVNLTK EVIEKQESLQ LKFLESLERI 240 ENQRKLRDEA WRMKEMTRVN QEHQVLVQET SITAAKDAAV IAFLQKVSPS TPPVPHNAIA 300 KVSTGRGSES RWPKAEVEAL IRLRMEMEMK YEENGQKGLL WEEISGGMRG IGYNRSSKRC 360 KEKWENINKY FKKVKDGKKK RGEDSKTCPY FHLLDALYKE KEKQASFDMN AQMEALVVEP 420 EQQWPPPFQA NHQVLHTIKG EEGKEEEEDS GSSSTDVED

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MDVVDSGVAV APPPEAVEPN EVGGGSNSGE EDKGLMLFED GEKNFGGNRW PRQETLALLK  60
IRSDMDAIFR DATLKAPLWD EISRKLGELG FNRTPKKCKE KFENVYKYHK RTKIGRCGKS  120
DNSKKVYKFS DELEAFDIHH HNHISVQSHH RHSIPPPKLI APSTVSSTID NSLPLNFQNI  180
SANGLFLSST SSSTASEEDK DTFRKTKKRK WRDFFVNLTK EVIEKQESLQ LKFLESLERI  240
ENQRKLRDEA WRMKEMTRVN QEHQVLVQET SITAAKDAAV IAFLQKVSPS TPPVPHNAIA  300
KVSTGRGSES RWPKAEVEAL IRLRMEMEMK YEENGQKGLL WEEISGGMRG IGYNRSSKRC  360
KEKWENINKY FKKVKDGKKK RGEDSKTCPY FHLLDALYKE KEKQASFDMN AQMEALVVEP  420
EQQWPPPFQA NHQVLHTIKG EEGKEEEEDS GSSSTDVED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-62	Trihelix family protein