PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926325.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 449aa MW: 49152.4 Da PI: 6.2865

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926325.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.8	7.3e-31	221	279	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_022926325.1 221 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 279 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MCSLFEMENL QGDLTDIVRG SRTSFGCKTE DPFSSDWIFS SEMPINFSSS SSSSSSSSSQ 60 LQDHAAARDH QQYSFGDPFC AAAPMRDPLF QELDICGFLN GGGNLEDKSG CGGSVFVGED 120 EAMKRPSNIF SRMLQISPPP PTIPNKFPIS ASPCVSPLLI PNCNSPLIPP INSDLHPSAL 180 QISSPTNPPG IKRRKSQARK VVCVPAPVAA TSRPNGEVIP SDLWAWRKYG QKPIKGSPYP 240 RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS SRSQQSKNNT 300 PNSSTLSSAS LPQKPTTAQE GPQNNNQHPN NNDNNGARSS ATSNHVKQEP PEEIQKPFAT 360 EAEGFPYRVA MAMAMPIHDN QSDDFFADLE ELQTDPSHLL FTQPQKLHQT QESGGLDDVV 420 AFNNLFDWAA EDNSHSFQEP PTGSKRGFY

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MCSLFEMENL QGDLTDIVRG SRTSFGCKTE DPFSSDWIFS SEMPINFSSS SSSSSSSSSQ  60
LQDHAAARDH QQYSFGDPFC AAAPMRDPLF QELDICGFLN GGGNLEDKSG CGGSVFVGED  120
EAMKRPSNIF SRMLQISPPP PTIPNKFPIS ASPCVSPLLI PNCNSPLIPP INSDLHPSAL  180
QISSPTNPPG IKRRKSQARK VVCVPAPVAA TSRPNGEVIP SDLWAWRKYG QKPIKGSPYP  240
RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS SRSQQSKNNT  300
PNSSTLSSAS LPQKPTTAQE GPQNNNQHPN NNDNNGARSS ATSNHVKQEP PEEIQKPFAT  360
EAEGFPYRVA MAMAMPIHDN QSDDFFADLE ELQTDPSHLL FTQPQKLHQT QESGGLDDVV  420
AFNNLFDWAA EDNSHSFQEP PTGSKRGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	6e-78	WRKY family protein