PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926361.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CPP

Protein Properties

Length: 572aa MW: 61880.6 Da PI: 7.6263

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926361.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.1	4e-14	114	153	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C N+ e+ XP_022926361.1 114 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCANCYNNVEN 153 89************************.******9875 PP
2	TCR	49.5	8.7e-16	199	237	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 + kgC+Ckks+ClkkYCeCf+a+ Cse+CkC dCkN e XP_022926361.1 199 HYKGCHCKKSSCLKKYCECFQANILCSENCKCMDCKNFE 237 789**********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MDDLPPQNAQ TGSEEPDSVV AFDVTAKKLV RQLDFAEFGG AVSPALPHFQ SQSRCQSESP 60 AVMVVQSPSQ PKSPQHLMVL PVGTQSPHPV AVRKPDSPKS RSRSVETKDA TPKKQKQCNC 120 KHSRCLKLYC ECFASGIYCD GCNCANCYNN VENEVSRREA VETTLERNPN AFRPKIASSP 180 HGPRESRDEI GEVVMLGKHY KGCHCKKSSC LKKYCECFQA NILCSENCKC MDCKNFEGSD 240 ERQALLHGDH VNNMAYIQQA ANAAITGAIG SSGYACLSTS KKRKGPELCF GPTGKDTPCN 300 SIAQFHQANN MLSSGASTSS PLPVAHAGSP AAPGPSKFSF RSLLADLIQM NDLKELCSVL 360 VVLSSEASKN IAEQRIAEKQ INDPLQISRA STGDRSQDQE ADAKAADVEC GSLNQGDRIV 420 HHNSNSDGSD TTRARSMSPG TLALMCDEKD TMFTGAALAH GLAGHGCNTS SHMLDKSVSE 480 VYIEQERIVL TKFRDCLNKL ITPGEIKETN SVEARNENHS KNFTSNSGYR QRTISNGVVK 540 NVALSAPRIP PIDAAAHHTS NKILPLPENG KE

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MDDLPPQNAQ TGSEEPDSVV AFDVTAKKLV RQLDFAEFGG AVSPALPHFQ SQSRCQSESP  60
AVMVVQSPSQ PKSPQHLMVL PVGTQSPHPV AVRKPDSPKS RSRSVETKDA TPKKQKQCNC  120
KHSRCLKLYC ECFASGIYCD GCNCANCYNN VENEVSRREA VETTLERNPN AFRPKIASSP  180
HGPRESRDEI GEVVMLGKHY KGCHCKKSSC LKKYCECFQA NILCSENCKC MDCKNFEGSD  240
ERQALLHGDH VNNMAYIQQA ANAAITGAIG SSGYACLSTS KKRKGPELCF GPTGKDTPCN  300
SIAQFHQANN MLSSGASTSS PLPVAHAGSP AAPGPSKFSF RSLLADLIQM NDLKELCSVL  360
VVLSSEASKN IAEQRIAEKQ INDPLQISRA STGDRSQDQE ADAKAADVEC GSLNQGDRIV  420
HHNSNSDGSD TTRARSMSPG TLALMCDEKD TMFTGAALAH GLAGHGCNTS SHMLDKSVSE  480
VYIEQERIVL TKFRDCLNKL ITPGEIKETN SVEARNENHS KNFTSNSGYR QRTISNGVVK  540
NVALSAPRIP PIDAAAHHTS NKILPLPENG KE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-161	CPP family protein