PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926378.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Dof

Protein Properties

Length: 244aa MW: 26663.5 Da PI: 9.1988

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926378.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.7	1.1e-37	23	81	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + +kcprCds ntkfCyynnyslsqPry+Ck+CrryWt+GG+lrnvPvGgg+rk k+ XP_022926378.1 23 PQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVGGGCRKGKRP 81 6789***************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MQRGRDDQDR RLKALQAQNQ AQPQPQKCPR CDSLNTKFCY YNNYSLSQPR YLCKTCRRYW 60 THGGTLRNVP VGGGCRKGKR PKQSSHSSDN SNSQPLPSLP LPQIVQSSLT TTPPPVIFSG 120 TPVITPSSFF NPVGELGSSS SWVNSFGSSQ GQRPIQPPEI IYEMMDQSSG KAAVSSSSQA 180 GWSESYINNY ISNPIAAAAG ENIVWTPNNN NNNNTAMAAT GNPTNNSTTI NQWPDYMAGF 240 DPPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	1e-32	Dof family protein