PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926469.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 285aa    MW: 32079.6 Da    PI: 7.1007
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926469.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-153885148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT +Ed llv+ +  +G g+W++ a + g++Rt+k+c++rw++yl
   XP_022926469.1 38 RGPWTVDEDSLLVHSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYL 85
                     89********************************************97 PP
2Myb_DNA-binding51.32.7e-1691134146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ +++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022926469.1  91 RGNLSPQEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 134
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MRGCSLMASP CKSQSQSQSQ SSSCSSSVVE DTQNGLRRGP WTVDEDSLLV HSISVHGEGR  60
WNLLAIRSGL RRTGKSCRLR WLNYLKPDVK RGNLSPQEQL LILDLHSRWG NRWSKIAQHL  120
PGRTDNEIKN YWRTRVQKQA KLLNIDTNSS EFKEIINRFW IPRLVQQINE SSNSPSSSFS  180
SPPPPPNMPP ARPASQLSDA DTLPAADGKR RHFDTEQNST SSESMDISQV SDPFSDVPSW  240
NHGSEMTAAD FQYPIGDSRS PLTGWVDDDD SFGGCLWNFD GLWQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25340.17e-72MYB family protein