PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926545.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 457aa MW: 52819.8 Da PI: 6.3081

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926545.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.4	3.9e-14	200	235	12	48
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 lv++v+q+G++ W+ Ia+t++ gR +kqc++rw+++l XP_022926545.1 200 LVQLVEQYGTRKWSHIAQTLP-GRIGKQCRERWHNHL 235 9******************.***********97 PP
2	Myb_DNA-binding	55	1.9e-17	241	283	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd l++a+++ G++ W+ Ia++++ gRt++++k++w+ XP_022926545.1 241 KDTWSEEEDRVLIEAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 283 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MEVESNLTEN LSSNQACKED ELSFQFLASK GNYLHEFHHL DSSSNPILED ENMCSLDHFN 60 PYSYGCSSNN SNTAVEDLYE LNKACADQNG GCGQVMDNFQ SSGDYYNFHQ MNQIDVMGLE 120 RNSIPLDFPD VKPVNFFVPD EVSCITSGNG HFQKATMNKN VNFSSLLRTS KGQKKPNVIK 180 GQWTVEEDRF DICVEKNRVL VQLVEQYGTR KWSHIAQTLP GRIGKQCRER WHNHLRPDIK 240 KDTWSEEEDR VLIEAHAEIG NKWAEIAKRL PGRTENSIKN HWNATKRRQY SKRKCRSKYP 300 RCSLLQDYIK SLDSNTTRHQ KKICPNDTKS KSKLADRHHR QPQTANFCPN DWTVPNSDLK 360 DEAEFYLDDN FFREGCSIDT LMENIAAASA DDANNYERKR YHGNEELVEF HQRSNVEMEK 420 LQNCAPVKTA AAMEFEVTKE LDLVEMMSQV NEVNKMR

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MEVESNLTEN LSSNQACKED ELSFQFLASK GNYLHEFHHL DSSSNPILED ENMCSLDHFN  60
PYSYGCSSNN SNTAVEDLYE LNKACADQNG GCGQVMDNFQ SSGDYYNFHQ MNQIDVMGLE  120
RNSIPLDFPD VKPVNFFVPD EVSCITSGNG HFQKATMNKN VNFSSLLRTS KGQKKPNVIK  180
GQWTVEEDRF DICVEKNRVL VQLVEQYGTR KWSHIAQTLP GRIGKQCRER WHNHLRPDIK  240
KDTWSEEEDR VLIEAHAEIG NKWAEIAKRL PGRTENSIKN HWNATKRRQY SKRKCRSKYP  300
RCSLLQDYIK SLDSNTTRHQ KKICPNDTKS KSKLADRHHR QPQTANFCPN DWTVPNSDLK  360
DEAEFYLDDN FFREGCSIDT LMENIAAASA DDANNYERKR YHGNEELVEF HQRSNVEMEK  420
LQNCAPVKTA AAMEFEVTKE LDLVEMMSQV NEVNKMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-93	MYB family protein