PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926635.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 309aa    MW: 33753.5 Da    PI: 9.4555
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926635.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.2e-19172205134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022926635.1 172 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 205
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAPPYRDSFP SNHDDLLRYS SSSDRHLFFP TTPLDSSPSS PLSFPLFPDL HRSNPDHPHS  60
LGFHHQEDDQ VHESNQEVET GLSFTIWKSE TSSNDHNHND SVKWSSSSSS SSSKIRLVIN  120
YNQTETPTKT IDAHRNFQDL NPMSPSPSPS PSDQTNKRNT LNDGGGAIIR TCSDCNTTKT  180
PLWRSGPRGP KSLCNACGIR QRKARRAMAE AANGGNSTAV VLKTNKAIIK PAATMKRKHK  240
EVVAATTTTA AAAAASAAGG GGRRKLCVED VKMGRRLSEI SSTYQRVFPQ DEREAAILLM  300
TLSYGLLHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.14e-27GATA family protein