PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926721.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

DBB

Protein Properties

Length: 207aa MW: 22588.2 Da PI: 6.8982

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926721.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.9	9.9e-09	3	43	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +C+ +++ e++ fC ++ lC+ C l+ H+ H+ XP_022926721.1 3 IRCDVCDQAEASVFCSADEAALCHGCDLHVHRAnklagkHS 43 58*****************************7666666665 PP
2	zf-B_box	29.7	1.4e-09	56	95	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......H 37 + C+ ++e ++ fC++++ lC++C ++H g H XP_022926721.1 56 PLCDICQERRALVFCQQDRAILCRECDISIH-GtnertqkH 95 78*****************************.435566666 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MKIRCDVCDQ AEASVFCSAD EAALCHGCDL HVHRANKLAG KHSRFSLLQP IKIDSPLCDI 60 CQERRALVFC QQDRAILCRE CDISIHGTNE RTQKHNRFLL TGVKLSSTSF SYQTSSSSNG 120 YNAAMDVKTR SSHACSKSPK MAAHETSSSP SSEKAAPSTS NYKVEDGQAS DGGSFSTSSI 180 SEYLETLPGW CVEEFLDPST AAANRFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	1e-58	DBB family protein