PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926740.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 143aa MW: 16228.6 Da PI: 5.6402

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926740.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.2	1.8e-41	58	134	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+++C++dl+ a+ yhrrhkvCe+hska+vv+++gleqrfCqqCsrfh++sefDe+krsCrrrLa+hnerrrk+ XP_022926740.1 58 RCQADSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRRRLAGHNERRRKNL 134 6*************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MEHSGDQGWG EPVEEEEEEE EEEDDDDDEI GFVKDERKKR AASGSRSGSG GGRTSVPRCQ 60 ADSCNVDLNG ARAYHRRHKV CEFHSKAAVV ILAGLEQRFC QQCSRFHSVS EFDETKRSCR 120 RRLAGHNERR RKNLPDFQGQ SST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	7e-38	SBP family protein