PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926768.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family M-type_MADS
Protein Properties Length: 290aa    MW: 32212.2 Da    PI: 8.6295
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926768.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF62.16.4e-2063111149
                     S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 
                     k+ien+  r +tfskRr gi KKA+EL +LC+aev v++fs+ gk + +
  XP_022926768.1  63 KKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 111
                     68******************************************97776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MSIKIQQCNK RKKTHTNSRE PLHPSVRPSI HPSIHPSSTL GFLMADGSTK IKQTKGRQKI  60
EMKKIENEDD RLITFSKRRS GIYKKASELA TLCGAEVGVV VFSPAGKPFS FAHPCIESVA  120
NKFLDENPQP NDNTHPLVEA HRRLRINELN QQHNQLLSQL DAEKEKGKAL EKLKKVRGNN  180
GRGWWESPTE ELGIEELQQV DGSLGELYQN VCHELKERGV LGSSSYSASN TLGFDHAGRE  240
ETIPFNILAT GAAAAAAAGP SSATYLPDPN PFDYGQQQQP HLPHHHHHHP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11015KRKKTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04100.13e-34M-type_MADS family protein