PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926805.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 406aa MW: 45957.2 Da PI: 6.4507

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926805.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.2	1.7e-19	167	263	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 +k+l++sdv+++gr+vlpk+ aee+ ++ +e++++ ++d s+++W++k++y +++s++yvl+ + +Fvk+ngL gD ++++ ++++++ XP_022926805.1 167 KKELKNSDVGSLGRIVLPKREAEENlpFLSDKEGMQILIRDvNSNKKWSMKYKYwaNNRSRMYVLE-STGDFVKENGLMMGDLITLY--EDDSRN 258 6899*********************555568899*7888****9888888889999.9*****************..445665 PP .EEEE CS B3 92 lvvkv 96 ++v++ XP_022926805.1 259 FYVTI 263 57765 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MDDDDDDHRH RRRNHRHNLN LPPFPPTTPL SPPPPPPKNS PVPILPHPPL GFSLRTPQSY 60 FVPPSLLSYG FPIGNEPINP LLPKDDGRRG LDAWTTKVAR SKRRLARQRS LSVTKPPSSS 120 SSSSGLAGSS DHHSKRITVT PSQPNRTHNL NLSTLSTPNK VLRILLKKEL KNSDVGSLGR 180 IVLPKREAEE NLPFLSDKEG MQILIRDVNS NKKWSMKYKY WANNRSRMYV LESTGDFVKE 240 NGLMMGDLIT LYEDDSRNFY VTIDKGEKHL SRDENEEKRK EAAAAAATAS AYPNMNIKDE 300 EEDDNLALLI EQLKHRSEDD ELPQSPCATS LLLSRSYFER GSYTGAEKGN DNNDNHNYNN 360 DNDNNDNDNN GKEVEAFEDC FGDLEILPEV SGFKFPILDY LRNDRI

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MDDDDDDHRH RRRNHRHNLN LPPFPPTTPL SPPPPPPKNS PVPILPHPPL GFSLRTPQSY  60
FVPPSLLSYG FPIGNEPINP LLPKDDGRRG LDAWTTKVAR SKRRLARQRS LSVTKPPSSS  120
SSSSGLAGSS DHHSKRITVT PSQPNRTHNL NLSTLSTPNK VLRILLKKEL KNSDVGSLGR  180
IVLPKREAEE NLPFLSDKEG MQILIRDVNS NKKWSMKYKY WANNRSRMYV LESTGDFVKE  240
NGLMMGDLIT LYEDDSRNFY VTIDKGEKHL SRDENEEKRK EAAAAAATAS AYPNMNIKDE  300
EEDDNLALLI EQLKHRSEDD ELPQSPCATS LLLSRSYFER GSYTGAEKGN DNNDNHNYNN  360
DNDNNDNDNN GKEVEAFEDC FGDLEILPEV SGFKFPILDY LRNDRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	6e-45	B3 family protein