PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926820.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 325aa    MW: 36749.3 Da    PI: 6.7784
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926820.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.96.5e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l +++++  g  +W++++++ g+ R++k+c++rw +yl
   XP_022926820.1 14 RGLWSPEEDEKLMKCIRKIEGQaCWSRVPKMAGLDRCGKSCRLRWINYL 62
                     788*****************99*************************97 PP
2Myb_DNA-binding51.32.8e-1668110145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      rg +++eE+  ++d+++ lG++ W+ Ia++++ gRt++++k++w+
   XP_022926820.1  68 RGCFSAEEERTIIDVHRILGNR-WAQIAKHLP-GRTDNEIKNFWN 110
                      899*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MGHHSCCTKV KVKRGLWSPE EDEKLMKCIR KIEGQACWSR VPKMAGLDRC GKSCRLRWIN  60
YLRPDLKRGC FSAEEERTII DVHRILGNRW AQIAKHLPGR TDNEIKNFWN SSIKKKLLAL  120
GLDPNTHNLL PARHQQQQQQ QQQQHHHAAA AAAAANNNNN NMNAYNDHDQ IMGDVVNGSY  180
VYNSNNYTWL EEQQQQQLQT GSSCWGAPIV PGMMNWELFE SGCGIVTGSS SNNSLDCDLG  240
MVIERERLRR MWEDEEADVG ALIMPLATEE AAGSVVMQSQ PQPQPHNNHT TTAAAAEFKN  300
LDFYFEESAV IPNPNPINFN SNLQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.12e-69MYB family protein