PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926825.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 247aa    MW: 27027 Da    PI: 5.8026
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926825.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.23.9e-34103160259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s fprsYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+
  XP_022926825.1 103 EDGYRWRKYGQKAVKNSIFPRSYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHP 160
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MSDEMFRDLF FSNPFRDSGF GDSETARNFG VSNEILGTPM SSCGSLSSSD AGAEEDGSGK  60
EKEKAMKDME DGGESSKAAG KAKKKETEPR FAFMTKTEID HLEDGYRWRK YGQKAVKNSI  120
FPRSYYRCTT PNCGVKKRVE RSFQDPSIVI TTYEGQHNHP IAAMLRGNLS AAAAFPPSML  180
APMPVVGGAG FLPKPLSDPS GNSQVVGGDG YVYSQSSFGY PYNEQQSEYG VLQDIFPSPS  240
SFFNRQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.16e-53WRKY family protein