PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926877.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WOX
Protein Properties Length: 294aa    MW: 32800.1 Da    PI: 7.7471
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926877.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox634.3e-202788257
                    T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++R+t+t++q+++L+el+++   r psa+++++++++l    +++ ++V++WFqN++a+e++
  XP_022926877.1 27 STRWTPTTDQIRILKELYYNngVRSPSADQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 88
                    58****************98678*************************************97 PP
2Wus_type_Homeobox114.45.5e-372690265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++tRWtPt++Qi+iL+ely+ +G+r+P++++iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
     XP_022926877.1 26 SSTRWTPTTDQIRILKELYYnNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 90
                       789***************9779*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDHQKAAAQG SEEGSNGKGG FVCRQSSTRW TPTTDQIRIL KELYYNNGVR SPSADQIQRI  60
SARLRQYGKI EGKNVFYWFQ NHKARERQKK RFTSSASDHL HHHHQQQQIP VPKQQQQQQL  120
QSSLISSKPE DSSSSPLFHT KYPPTPSSSV MVAVGHMGNY GYGSTTFENS FRECSISSGG  180
SSSMVGSRRS HHMGSWIGVD PYSSPASAAA TVFEKTKYVE ESMEDEEQEI ETLPLFPIHD  240
DRSLGGFCSM KPKYSDGYYT TTWYGRSDDG ATGSRTSLEL SLNSYAAISP DDAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-42WOX family protein