PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926884.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 621aa MW: 66958.9 Da PI: 7.0363

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926884.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.2	5.4e-31	349	407	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_022926884.1 349 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDTTILITTYEGNHNHP 407 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MDKGWGLTLR DSDHSIGFFS NKPPPSTVNS FHSVMFQGID FPGKPGRTDD DKPALPLPDH 60 TRLPVNEVDF FSDNKRVVDD REDEDSKPPV NIIATAVNKD HNNFTAPTTA FNRVNTGLHL 120 LTANTGSDQS TVDDGISSDG EDKRAKNELA QLQVELQRMN AENHKLRDML SHVRNNYTTL 180 QMHISTFMQQ QQQQQQQNQQ NQALESAHER QPTDKHDQVG KVVIPRQFMD LGPTGKTGGG 240 DHELFHSSSD ERTGSGSPLN NTETASKKST GRDQETGPSD QENSNLRSDG KRSMGREESP 300 ESESHGWGGP NKAPRLNPSS KPLDQQSTEA TMRKARVSVR ARSEAPMISD GCQWRKYGQK 360 MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA EDTTILITTY EGNHNHPLPP AAMAMASTTT 420 AAASMLLSGS MSSADHNLMN PNLLARAILP CSSSMATISA SAPFPTITLD LTHTPNPLQF 480 QRPAPTPFHV PFEAGQPPSA AAQLPQVLGQ ALYNQSKFSG LQLSHDMGAN SSHLGHHQIS 540 QPAVASSQPS GASFADTLSA ATAAITADPN FTAALAAAIS SIIGGAHSNN NNTTPTNTTS 600 TSNNNGSSNN NNTKISSFPG K

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MDKGWGLTLR DSDHSIGFFS NKPPPSTVNS FHSVMFQGID FPGKPGRTDD DKPALPLPDH  60
TRLPVNEVDF FSDNKRVVDD REDEDSKPPV NIIATAVNKD HNNFTAPTTA FNRVNTGLHL  120
LTANTGSDQS TVDDGISSDG EDKRAKNELA QLQVELQRMN AENHKLRDML SHVRNNYTTL  180
QMHISTFMQQ QQQQQQQNQQ NQALESAHER QPTDKHDQVG KVVIPRQFMD LGPTGKTGGG  240
DHELFHSSSD ERTGSGSPLN NTETASKKST GRDQETGPSD QENSNLRSDG KRSMGREESP  300
ESESHGWGGP NKAPRLNPSS KPLDQQSTEA TMRKARVSVR ARSEAPMISD GCQWRKYGQK  360
MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA EDTTILITTY EGNHNHPLPP AAMAMASTTT  420
AAASMLLSGS MSSADHNLMN PNLLARAILP CSSSMATISA SAPFPTITLD LTHTPNPLQF  480
QRPAPTPFHV PFEAGQPPSA AAQLPQVLGQ ALYNQSKFSG LQLSHDMGAN SSHLGHHQIS  540
QPAVASSQPS GASFADTLSA ATAAITADPN FTAALAAAIS SIIGGAHSNN NNTTPTNTTS  600
TSNNNGSSNN NNTKISSFPG K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	1e-132	WRKY family protein