PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926948.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1699aa MW: 192501 Da PI: 4.702

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926948.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	2e-19	30	86	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le++F+ + yps+++r+eL++klgLt+rq ++WF+ rR k+kk XP_022926948.1 30 RPKRQMKTPFQLETLEKAFALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKK 86 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1699 aa Download sequence
MEAAASDGGN HNLNNDNINK ISNSSEGLSR PKRQMKTPFQ LETLEKAFAL ETYPSESTRA 60 ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRNVVPALP DSPIDELRVV AEPGSDYASG 120 SGSGSSPFGD VGLRNVASGS GGEDMPMTRR YYEPSRSIME LRAIACVESQ LGEPLREDGP 180 IIGIEFDSLP PDAFGAPLVA EQQKRSGHLY GDKYDQRDAK SNKATARAFP EYSFMPDQSR 240 IRADAYGPVA QSHYPDSLVE EQQGVAVPSP ADDNTFVPAS IRNPIVAQED SYMLPDGQVF 300 PNDVIIRMER KRKSEEARLN KEAEAHEIRM RKELEKQDNL RKKSEERMRK EMEKQDRERR 360 KEEERLQREK QREVERLKRE ERRELERREK FLQREYLKAE KRRQKEAIRK EKEAVRRKAA 420 IEKATARRIA RESMELIEDE QLELMEIAAA NKGLSSILSL DHDTLQNLES FRDYLGAFPP 480 KSVQLKKPFS IQPWINSEEN IGNLLMVWRF FITFSDVLEL WPFTLDEFVQ ALHDYDSRLL 540 GEIHICLLRL IVKDIEDVAR TPSAGLGMNQ IGVANTGGGH PQIVEGAYAW GFDICNWQKH 600 LNPLTWPEIF RQLALSAGFG PQLKRSLAWS EMRSNDEAKC GEDVVSTLRN GSAAENAFSI 660 MQEKGLLAPR RSRHRLTPGT VKFAAFHVLS LEGSEGLTVL ELAEKIQRSG LRDLSTSRTP 720 EASISVALTR DTKLFERIAP STYRVRAPYR KDPDDAEDLL SVARKKIQVF QNGFLAGEDA 780 DDVERDEESE CDDVDEDPEV DDGATTSLMN EDVSKGDANL RVENENSCHD IDGNPQNEIA 840 KNIPSSPLSG SKDTKYLNIP TEQHAAVDGT TVTDLDQENM EIDESKEGES WIQGLTEGEY 900 HDLSVEERLN ALIALTSIAN EGNSIRLVLE DRLEAANAVK KQMLAEAQID KSRLKEEIIT 960 KSDFPIHIVS KVETELNGSA MEDGQSPFPV ADNQNNETTL CTAENLGSVP NERATLVPDF 1020 FPVPDNFLAQ QCGHASKRSR SQLKSYIAHR AEEMYTYRSL PLGRDRRRNR YWQFVASSSS 1080 NDPGSGRIFV EMYDGKWMLI DSEEGFDALS MALDTRGVRE SHLRIMLQMI ETSFKENVRR 1140 NLQCVNVMVQ SRITPKNEND ESSSSPDCNA SFNSPSSTVC GLNLDTTITS SSFRIELGRN 1200 ENEKKAAFKR YQDLQRWMLR ECFSTSTLCA MEFGEKRCTP LLDICDSCLC LFDSQHSHCS 1260 SCHQTYGTSE NDTNFLEHEC HCTRERKSYH WDTHALDASL PLKSRLLKAL LAFIEVHVPS 1320 EAFQLFWTEH RKDWGVRMKL SSTIEELLQI LTLFESVIKR DFLKSDFTTT DEHLSSCSIS 1380 RNVIHDAADI GSVLTLPWIP RTSAAVALRL CEIDVSIYYI GCEKPEPDQY KEIGEHVNFP 1440 SRFVQIKNEN ELDYDGLMKQ ENLADPKSLR NSYKRGGRRS RDHGRRKRWQ KKVNGSKPSR 1500 VRPNVKSNEK MNEEQRELGQ GMQVLGVRGP RTVRKRRAEN SIPDEGLLGL VPSSSTQNID 1560 ESPKDYIGEW EDEKMDRFVD MEDDENVMED GENEEDEENV NNVEPMDSDE DAQEVGYEQG 1620 SWEYGIDNGT SNRWNGDLGV ASDEEDVELS EDYNGTEEGG NDFGEEELDD DTSVESDCSP 1680 NRIGNNGGRE SPVSDDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1699 aa Download sequence

MEAAASDGGN HNLNNDNINK ISNSSEGLSR PKRQMKTPFQ LETLEKAFAL ETYPSESTRA  60
ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRNVVPALP DSPIDELRVV AEPGSDYASG  120
SGSGSSPFGD VGLRNVASGS GGEDMPMTRR YYEPSRSIME LRAIACVESQ LGEPLREDGP  180
IIGIEFDSLP PDAFGAPLVA EQQKRSGHLY GDKYDQRDAK SNKATARAFP EYSFMPDQSR  240
IRADAYGPVA QSHYPDSLVE EQQGVAVPSP ADDNTFVPAS IRNPIVAQED SYMLPDGQVF  300
PNDVIIRMER KRKSEEARLN KEAEAHEIRM RKELEKQDNL RKKSEERMRK EMEKQDRERR  360
KEEERLQREK QREVERLKRE ERRELERREK FLQREYLKAE KRRQKEAIRK EKEAVRRKAA  420
IEKATARRIA RESMELIEDE QLELMEIAAA NKGLSSILSL DHDTLQNLES FRDYLGAFPP  480
KSVQLKKPFS IQPWINSEEN IGNLLMVWRF FITFSDVLEL WPFTLDEFVQ ALHDYDSRLL  540
GEIHICLLRL IVKDIEDVAR TPSAGLGMNQ IGVANTGGGH PQIVEGAYAW GFDICNWQKH  600
LNPLTWPEIF RQLALSAGFG PQLKRSLAWS EMRSNDEAKC GEDVVSTLRN GSAAENAFSI  660
MQEKGLLAPR RSRHRLTPGT VKFAAFHVLS LEGSEGLTVL ELAEKIQRSG LRDLSTSRTP  720
EASISVALTR DTKLFERIAP STYRVRAPYR KDPDDAEDLL SVARKKIQVF QNGFLAGEDA  780
DDVERDEESE CDDVDEDPEV DDGATTSLMN EDVSKGDANL RVENENSCHD IDGNPQNEIA  840
KNIPSSPLSG SKDTKYLNIP TEQHAAVDGT TVTDLDQENM EIDESKEGES WIQGLTEGEY  900
HDLSVEERLN ALIALTSIAN EGNSIRLVLE DRLEAANAVK KQMLAEAQID KSRLKEEIIT  960
KSDFPIHIVS KVETELNGSA MEDGQSPFPV ADNQNNETTL CTAENLGSVP NERATLVPDF  1020
FPVPDNFLAQ QCGHASKRSR SQLKSYIAHR AEEMYTYRSL PLGRDRRRNR YWQFVASSSS  1080
NDPGSGRIFV EMYDGKWMLI DSEEGFDALS MALDTRGVRE SHLRIMLQMI ETSFKENVRR  1140
NLQCVNVMVQ SRITPKNEND ESSSSPDCNA SFNSPSSTVC GLNLDTTITS SSFRIELGRN  1200
ENEKKAAFKR YQDLQRWMLR ECFSTSTLCA MEFGEKRCTP LLDICDSCLC LFDSQHSHCS  1260
SCHQTYGTSE NDTNFLEHEC HCTRERKSYH WDTHALDASL PLKSRLLKAL LAFIEVHVPS  1320
EAFQLFWTEH RKDWGVRMKL SSTIEELLQI LTLFESVIKR DFLKSDFTTT DEHLSSCSIS  1380
RNVIHDAADI GSVLTLPWIP RTSAAVALRL CEIDVSIYYI GCEKPEPDQY KEIGEHVNFP  1440
SRFVQIKNEN ELDYDGLMKQ ENLADPKSLR NSYKRGGRRS RDHGRRKRWQ KKVNGSKPSR  1500
VRPNVKSNEK MNEEQRELGQ GMQVLGVRGP RTVRKRRAEN SIPDEGLLGL VPSSSTQNID  1560
ESPKDYIGEW EDEKMDRFVD MEDDENVMED GENEEDEENV NNVEPMDSDE DAQEVGYEQG  1620
SWEYGIDNGT SNRWNGDLGV ASDEEDVELS EDYNGTEEGG NDFGEEELDD DTSVESDCSP  1680
NRIGNNGGRE SPVSDDYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	87	RRLKDKKE
2	397	403	LKAEKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein