PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926952.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 290aa    MW: 32340.2 Da    PI: 9.4692
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926952.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.98.8e-32411831128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...lelee.vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 
                     lp+G++F+P+d++++ e+L ++v+++k   ++l + +i+++d    i++++P++Lp  ++++ +  +fF++ +k+y+ g+rk+r+++      + 
  XP_022926952.1  41 LPAGVKFDPSDQQIL-EHLDAQVKRDKrklHPLLDqFIPTLDgedgICYTHPQNLP-GMRKDGEIRHFFHRPSKAYTAGSRKRRKVQtdkegtET 133
                     799**********99.99*****99996663333323666655556**********.566666777******************74434544467 PP

             NAM  82 yWkatgkdkevlsk.kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++++ + +g ++g kk+Lv+y   g+++k++kt+W+mh+y+l
  XP_022926952.1 134 RWHKTGKTRPIIGAdGGVVMGFKKILVLYsnYGSERKPQKTNWIMHQYHL 183
                     8***********98677889*********65579999***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MNWLNPNEGG LGVAFPSIIC PSCAHPIRFQ RQGGFEGWGR LPAGVKFDPS DQQILEHLDA  60
QVKRDKRKLH PLLDQFIPTL DGEDGICYTH PQNLPGMRKD GEIRHFFHRP SKAYTAGSRK  120
RRKVQTDKEG TETRWHKTGK TRPIIGADGG VVMGFKKILV LYSNYGSERK PQKTNWIMHQ  180
YHLGVTEHEK DGQLVASKVF FQKQPRQSSS SHQNSIVKQW GGGDGGYSPD TSAVFVDYGN  240
PMMSSLYEIG GGEKVHREFD FGEGEGEASS SVVVSGAHST HSNTRQTTFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16269VKRDKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28470.16e-96NAC family protein