PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926977.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 401aa    MW: 43950.6 Da    PI: 5.3441
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926977.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.99.8e-052953271754
                     HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++   L++l+ +      +K + a++L +A+eYIk L
  XP_022926977.1 295 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 327
                     55666677777776.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MAEDFQAAIC GDNWWSSSRN MMVTVGGLSP CSVGIGDLGW PPADDFLDIK PKSATDSDHN  60
NNNNNSMLFQ DYSTFQMMGF ALSSSTTSDH LNQPDGLLCG GGRGESNFNS NGIERYKDEE  120
IKTSFTSDSS FINGLKQGDD EDYNMLEQNG LMSVNCSSTT NTPTCQGLFP LDSTLYGYPH  180
QQQQQQEPPH AHSLFNATHP HPHPQPVSAA LHFANNTPFW NAPTAASSTH IPQGIASLLE  240
QKSAKPINNG NCENGQEPKK CDKNSANESA PVFKRPRIET PSPLPTFKVR KEKLGDRVTA  300
LQQLVSPFGK TDTASVLHEA IEYIKFLHDQ VSVLSTPYMK SNNGITPTQQ HQQVCEKEDP  360
DCPKQDLRSR GLCLVPVSST FPVSNVGTAD FWTPTFGGTF R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.16e-59bHLH family protein