PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022927022.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 254aa MW: 28063.2 Da PI: 10.0728

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022927022.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.6	3.9e-12	65	111	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riNs +++Lr+l+P + K +Ka+ L ++v+ +k+L XP_022927022.1 65 KNHSEAERRRRERINSHLSTLRDLVPCP-----IKRDKATLLAEVVRQVKEL 111 58***********************9.....6999*999999988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MAYSYDATTS IDPFSLENLS FGFVRGGSML SKSFALNGEK GELVKASTQP SKKRVSEEKA 60 LAALKNHSEA ERRRRERINS HLSTLRDLVP CPIKRDKATL LAEVVRQVKE LKKKAAEASN 120 GVFVPLDTDE VNVEPCGVGA NGHMTLKATI CCEYQPELLC DLKQALDSLH LKLVKSEIST 180 LGNRVKSIFF FTSPIAENAA HPEASRLLAS SVHRAISLVL EKASSVEYSP RTTTTLPRKR 240 RRLSSFHTSR QPIV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	76	ERRRRE
2	237	243	PRKRRRL
3	238	242	RKRRR
4	239	243	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56770.1	1e-37	bHLH family protein