PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927072.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 278aa    MW: 31392.4 Da    PI: 6.1873
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927072.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.98.1e-1624114186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+++ + +Li+a  ++  +l+rg+l++++W++v++ +       ++ +r+ +qCk++++ ++k+yk ++++    +   +s++p++ +l+
  XP_022927072.1  24 CWSEDATSTLIDAWGRRFLDLNRGNLRQKDWQDVADSVnslhgLTKKTHRTDVQCKNRIDTVKKKYKTERARVAASHGSFVSSWPFYARLD 114
                     7**************************************9999999*************************99998899999******998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGDLTDSLTP SSANSRQVPI REDCWSEDAT STLIDAWGRR FLDLNRGNLR QKDWQDVADS  60
VNSLHGLTKK THRTDVQCKN RIDTVKKKYK TERARVAASH GSFVSSWPFY ARLDELIGPT  120
VSMKKPSSPP MALPLPFRKT PPPAVAATPA VVAVSQKRTA AAMDDGYFRR NYSAIAAAAA  180
AAALTEEEED DEEEEEERVS DDEEAEGEGM SRLARAIKRF GEVYERVEAE KVRLMVELEK  240
QRMQFAKDLE VQRMHMFMET QVQLERIKRG KKSNPSDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11100.12e-49Trihelix family protein