PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927093.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 201aa    MW: 22271.5 Da    PI: 4.6336
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927093.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-171767155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+ykGVr++k +g++v+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  XP_022927093.1 17 SRYKGVRRRK-WGKFVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 67
                    79*****998.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAKPSSPHKS AAHNTDSRYK GVRRRKWGKF VSEIRLPNSR ERIWLGSYDS AEKAARAFDA  60
ALFCLRGSSA RFNFPNNPPD IPGATLLSRA EIQTVAAQFA NSDPSPSTEY SQPIVDSPSP  120
SVASELTTAV TECDEISSFL DFHANMGLGP ENYGSEFGSF LPEYNPFLDE IFNSSTAPCF  180
DYGDENFDAM TTHQDSFLWN F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12026KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-52ERF family protein