PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927127.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 328aa    MW: 36937.4 Da    PI: 4.6412
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927127.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.57.4e-062112481254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_022927127.1 211 RKEKLGDKITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 248
                     67788899********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MDDEFPPGIC GRKLWDTTKI PFSPAAATPS SCSVSDSTFL IDPTVRTPSN WNQNFLGDDG  60
QRVDTTLMVD YDHQETNASE EPQNPSIFNA DHDCMFLMGQ THSNFYDNIV TTTSQRLPMA  120
YPFGMISNGY TPTLLPSSLD QPKQFLVNNR TINSSCHPMF ETLNFTTKLI SYDEVVRDSS  180
RVEMKNKSNE ITTIKRARND MPSSLPTFKV RKEKLGDKIT ALQQLVSPFG KTDTASVLHE  240
AIEYIKFLHD QVRVLSTPYM EMGEQEQEQE QQVTNYDGGQ LVKEELEENK KQDLTSRGLC  300
LVPIPSSVAL ANGNTLDFWS PTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.17e-45bHLH family protein