PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927138.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 844aa    MW: 92992 Da    PI: 6.6458
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927138.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.32.6e-181876357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+++Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022927138.1 18 KYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 76
                    6789*****************************************************97 PP
2START171.36.5e-541663732205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++ +++l v s+g  g+++l 
  XP_022927138.1 166 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPT-KVAEILKDRLSWFRDCRCVDVLSVMSTGngGTIELL 259
                     68999*****************************************************.8999999999************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf+++Ry+ +l++g++vi+++S++s +  p+    ss+vRae+lpSg+li+ +++g s +++v+hvdl++++++++lr+l+
  XP_022927138.1 260 YTQTYAPTTLAAaRDFWTLRYTTSLEDGSLVICERSLTSSTGGPSgppPSSFVRAEMLPSGYLIRACEDG-SLIHIVDHVDLDAWSVPEVLRPLY 353
                     ***************************************99999888899********************.************************ PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+ + +++++va+l++ ++
  XP_022927138.1 354 ESTKILAQRRTVAALRYVRQ 373
                     ***************99765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 844 aa     Download sequence    
MALAMHRDSL NKQMDTSKYV RYTPEQVDAL ERVYAECPKP SSLRRQQLIR ECPILSNIEP  60
KQIKVWFQNR RCREKQRKEA SRLQTVNRKL TAMNKLLMEE NDRLQKQVSR LVYKNGYMRQ  120
QLRTASGTTT DNSCESVVMS GQHHQQQNPT KHTQKDANNP AGLLAIAEET LAEFLSKATG  180
TAVDWVQMIG MKPGPDSIGI VAVSRNCNGV AARACGLVSL EPTKVAEILK DRLSWFRDCR  240
CVDVLSVMST GNGGTIELLY TQTYAPTTLA AARDFWTLRY TTSLEDGSLV ICERSLTSST  300
GGPSGPPPSS FVRAEMLPSG YLIRACEDGS LIHIVDHVDL DAWSVPEVLR PLYESTKILA  360
QRRTVAALRY VRQIAHEASG EIQLGGGRQP AVLRTFSQRL SRGFNDAVNG FVDDGWSLMD  420
SDGVEDVTVV VNSSPNKFIG SQYNQSLYPT FGGVLCAKAS MLLQNVPPAL LVRFLREHRS  480
EWADYGVDAY SAACLKSSAY AVPCARPGGF PSGQVILPLA HTVENEEFLE VVRLEGHAMF  540
PEEAALGGRD MYLLQLCSGV DESTVGSCAQ LVFAPIDESF ADDAPLLPSG FRVIPLESKT  600
DASAATRTLD LASTLEVRPG SARPGGETDA TNYNLRSVLT IAFQFTFENH MRDSVAAMAR  660
QYVRTVVASV QRVAMAIAPS QLGSQIGPKS LPSSPEALTL SQWIARSYRI HTGAELFQVE  720
SQSHDAILKQ LWHHSDTILC CSVKTNASPV FTFANQAGLD MLETTLVALQ DITLDKILED  780
AGRKILCSEF SKIMQQGFAY LPAGICISSM GRPVSYEQAI AWKVLNDDDV HHCLAFMFVN  840
WSFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein