PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927161.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 271aa    MW: 29607.7 Da    PI: 5.1856
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927161.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.24.6e-3077135259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+ver++ dp+++ itY+ eHnh+
  XP_022927161.1  77 SDSWAWRKYGQKPIKGSPYPRAYYRCSSSkGCPARKQVERNRLDPTMLLITYSCEHNHS 135
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDDVTFNNNH QFYSVDLLED SDEFKAAPDS PPPPPPPLPP NSTAAKKGRR GMKKKVVSVR  60
INGDGPRNSS GSTTPPSDSW AWRKYGQKPI KGSPYPRAYY RCSSSKGCPA RKQVERNRLD  120
PTMLLITYSC EHNHSGPVSR NNNHHQAAAV KPTSPETVPV HPEPEAEEKF VESLEDQFSW  180
FGEMETTSST VLESSIFSGR SSSGVGDSIS SDVAMPFPMG DDDVDDSLFA DLGELPECSV  240
VFRHGGGPEL PVDEQPATSQ RRITPWCGAT T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.11e-56WRKY family protein