PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927163.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 258aa    MW: 28135 Da    PI: 4.8037
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927163.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY42.61.2e-13841222259
                     EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY  22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++YYrC+s+ gCp++k+ver++ dp+++ itY+ eHnh+
  XP_022927163.1  84 KAYYRCSSSkGCPARKQVERNRLDPTMLLITYSCEHNHS 122
                     79*****998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MDDVTFNNNH QFYSVDLLED SDEFKAAPDS PPPPPPPLPP NSTAAKKGRR GMKKKVVSVR  60
INGDGPRNSS GSTTPPSDSW AWRKAYYRCS SSKGCPARKQ VERNRLDPTM LLITYSCEHN  120
HSGPVSRNNN HHQAAAVKPT SPETVPVHPE PEAEEKFVES LEDQFSWFGE METTSSTVLE  180
SSIFSGRSSS GVGDSISSDV AMPFPMGDDD VDDSLFADLG ELPECSVVFR HGGGPELPVD  240
EQPATSQRRI TPWCGATT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.18e-42WRKY family protein