PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927387.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SBP
Protein Properties Length: 156aa    MW: 17185 Da    PI: 8.2191
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927387.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP128.13.4e-4072148278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cq+++C+adls+ k+yh rhkvCe+h+ka +v+v+g++qrfCqqCsrfh l+efDe+krsCr+rLa+hn+rrrk+++
  XP_022927387.1  72 CQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFCQQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSS 148
                     **************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MATGKADGKR RLNYYDMEEE EEEEEEEVEV VDGELGFGGD FNKKKKTLCS GGGSNKKSGS  60
GYGGAATAAP SCQADNCNAD LSSSKRYHCR HKVCEFHAKA LAVMVAGIHQ RFCQQCSRFH  120
GLQEFDETKR SCRKRLAGHN QRRRKSSSDV HGGTST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141146QRRRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.18e-39SBP family protein