PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927389.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SBP
Protein Properties Length: 194aa    MW: 21506.4 Da    PI: 6.972
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927389.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP65.79.8e-21145190247
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs 47 
                     Cq+++C+adls+ k+yh rhkvCe+h+ka +v+v+g++qrfCqqCs
  XP_022927389.1 145 CQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFCQQCS 190
                     *********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MKKNIFFPQT HLLFFCFKAK KWSLWSSDLS SSSVLLLLLL SFTSFLFSEA TNFLILLPFL  60
FSSSSLVCFG SSEMATGKAD GKRRLNYYDM EEEEEEEEEE VEVVDGELGF GGDFNKKKKT  120
LCSGGGSNKK SGSGYGGAAT AAPSCQADNC NADLSSSKRY HCRHKVCEFH AKALAVMVAG  180
IHQRFCQQCS SDRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.27e-19SBP family protein