PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022927557.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 366aa MW: 41690.2 Da PI: 8.7684

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022927557.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160	9.4e-50	22	147	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+Ptdeel+++yLkkk++g + ++ e+i+ev+iyk+ePwdLp k++ ++++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s XP_022927557.1 22 MFPGFRFSPTDEELISFYLKKKLDGYEKSV-EIIAEVEIYKYEPWDLPaKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKS 115 579**********************999.99***********767778899********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyr 127 +++++g+k+tLvf++grapkge+t+W+mhey+ XP_022927557.1 116 -GSNVIGTKRTLVFHTGRAPKGERTEWIMHEYN 147 .99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MAAVAENGVS KELQLSMAVS SMFPGFRFSP TDEELISFYL KKKLDGYEKS VEIIAEVEIY 60 KYEPWDLPAK SIIQSDNEWF FFSPRGKKYP NGNQTRRATD LGYWKATGKE RNVKSGSNVI 120 GTKRTLVFHT GRAPKGERTE WIMHEYNNKD KAQDFLVVCR LRRNNEFRQH SSSNRASCSK 180 MNLSSLQAHS GEQVDSTSES NQKDVAEAAL VECSDGQKDY GSDDFYSDIL KDDIINLDTA 240 PYDAASDLMP LDFHRSDTAR ESQTEANDGL EWLPSQGFAN RRIRLKRREA TKAMKLDAVK 300 IGGSRYKVEK VRFSSLELWR SRLMNTASSI SIFGCYVRVV VIFFLLILLA LFMSRLEVFG 360 MPKGLY

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MAAVAENGVS KELQLSMAVS SMFPGFRFSP TDEELISFYL KKKLDGYEKS VEIIAEVEIY  60
KYEPWDLPAK SIIQSDNEWF FFSPRGKKYP NGNQTRRATD LGYWKATGKE RNVKSGSNVI  120
GTKRTLVFHT GRAPKGERTE WIMHEYNNKD KAQDFLVVCR LRRNNEFRQH SSSNRASCSK  180
MNLSSLQAHS GEQVDSTSES NQKDVAEAAL VECSDGQKDY GSDDFYSDIL KDDIINLDTA  240
PYDAASDLMP LDFHRSDTAR ESQTEANDGL EWLPSQGFAN RRIRLKRREA TKAMKLDAVK  300
IGGSRYKVEK VRFSSLELWR SRLMNTASSI SIFGCYVRVV VIFFLLILLA LFMSRLEVFG  360
MPKGLY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	281	289	RRIRLKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	3e-91	NAC family protein