PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022927558.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 359aa MW: 40962.4 Da PI: 8.5389

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022927558.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	153.5	9.6e-48	22	140	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrF+Ptdeel+++yLkkk++g + ++ e+i+ev+iyk+ePwdLp ++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s XP_022927558.1 22 MFPGFRFSPTDEELISFYLKKKLDGYEKSV-EIIAEVEIYKYEPWDLP------DNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKS- 108 579**********************999.99**********9......68**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 +++++g+k+tLvf++grapkge+t+W+mhey+ XP_022927558.1 109 GSNVIGTKRTLVFHTGRAPKGERTEWIMHEYN 140 99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MAAVAENGVS KELQLSMAVS SMFPGFRFSP TDEELISFYL KKKLDGYEKS VEIIAEVEIY 60 KYEPWDLPDN EWFFFSPRGK KYPNGNQTRR ATDLGYWKAT GKERNVKSGS NVIGTKRTLV 120 FHTGRAPKGE RTEWIMHEYN NKDKAQDFLV VCRLRRNNEF RQHSSSNRAS CSKMNLSSLQ 180 AHSGEQVDST SESNQKDVAE AALVECSDGQ KDYGSDDFYS DILKDDIINL DTAPYDAASD 240 LMPLDFHRSD TARESQTEAN DGLEWLPSQG FANRRIRLKR REATKAMKLD AVKIGGSRYK 300 VEKVRFSSLE LWRSRLMNTA SSISIFGCYV RVVVIFFLLI LLALFMSRLE VFGMPKGLY

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MAAVAENGVS KELQLSMAVS SMFPGFRFSP TDEELISFYL KKKLDGYEKS VEIIAEVEIY  60
KYEPWDLPDN EWFFFSPRGK KYPNGNQTRR ATDLGYWKAT GKERNVKSGS NVIGTKRTLV  120
FHTGRAPKGE RTEWIMHEYN NKDKAQDFLV VCRLRRNNEF RQHSSSNRAS CSKMNLSSLQ  180
AHSGEQVDST SESNQKDVAE AALVECSDGQ KDYGSDDFYS DILKDDIINL DTAPYDAASD  240
LMPLDFHRSD TARESQTEAN DGLEWLPSQG FANRRIRLKR REATKAMKLD AVKIGGSRYK  300
VEKVRFSSLE LWRSRLMNTA SSISIFGCYV RVVVIFFLLI LLALFMSRLE VFGMPKGLY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	274	282	RRIRLKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	3e-87	NAC family protein