PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927560.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 307aa    MW: 35090.7 Da    PI: 10.2376
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927560.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.71.3e-28148852127
             NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                     k +++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s +++++g+k+tLvf++grapkge+t+W+mhey+
  XP_022927560.1  14 KFTNNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKS-GSNVIGTKRTLVFHTGRAPKGERTEWIMHEYN 88 
                     44678**************************************.99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MATRRALKSS RRSKFTNNEW FFFSPRGKKY PNGNQTRRAT DLGYWKATGK ERNVKSGSNV  60
IGTKRTLVFH TGRAPKGERT EWIMHEYNNK DKAQDFLVVC RLRRNNEFRQ HSSSNRASCS  120
KMNLSSLQAH SGEQVDSTSE SNQKDVAEAA LVECSDGQKD YGSDDFYSDI LKDDIINLDT  180
APYDAASDLM PLDFHRSDTA RESQTEANDG LEWLPSQGFA NRRIRLKRRE ATKAMKLDAV  240
KIGGSRYKVE KVRFSSLELW RSRLMNTASS ISIFGCYVRV VVIFFLLILL ALFMSRLEVF  300
GMPKGLY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1222230RRIRLKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.12e-53NAC family protein