PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927582.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LFY
Protein Properties Length: 368aa    MW: 41865.4 Da    PI: 7.386
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927582.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY176.13e-5411491152
         FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95 
                     mdpea+sa+lfkwdpr ++          a +++     +    +  l +leelf+ayG+ry+t+akiaelGftvstL+dmkdeel+d+++sls+
  XP_022927582.1   1 MDPEALSATLFKWDPRGMVGGGGGAS-LPAPLPP----YSLRPRELGLGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSH 90 
                     9***************9885544333.2332333....33556677799********************************************** PP

         FLO_LFY  96 ifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglsee 152
                     ifr++llvGeryGikaavraerrr+++e ++++rr+l+s+d+++  +ldalsqeg+ e 
  XP_022927582.1  91 IFRWELLVGERYGIKAAVRAERRRVDDEMDSSRRRHLFSNDTHNnvVLDALSQEGTWEA 149
                     *****************************9********9998887799*******8775 PP
2FLO_LFY412.74.1e-126155356184386
         FLO_LFY 184 ekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcP 278
                      +kk++k ++  kkk+ +++eed+++e+ee   ee+ + + +erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGekcP
  XP_022927582.1 155 MRKKQRK-RNGSKKKQVMVMEEDHHDETEEGGGEEEDNMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCP 248
                     3333322.2222333333344555555556666677777889***************************************************** PP

         FLO_LFY 279 tkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtk 373
                     tkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawrqacykplva aa+qgwdida+fnahprL+iWYvPtk
  XP_022927582.1 249 TKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATAASQGWDIDAIFNAHPRLAIWYVPTK 343
                     *********************************************************************************************** PP

         FLO_LFY 374 LrqLChlerskas 386
                     LrqLCh+er++a+
  XP_022927582.1 344 LRQLCHAERNSAK 356
                     *********9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MDPEALSATL FKWDPRGMVG GGGGASLPAP LPPYSLRPRE LGLGGLEELF QAYGIRYYTA  60
AKIAELGFTV STLLDMKDEE LEDMINSLSH IFRWELLVGE RYGIKAAVRA ERRRVDDEMD  120
SSRRRHLFSN DTHNNVVLDA LSQEGTWEAV AAGEMRKKQR KRNGSKKKQV MVMEEDHHDE  180
TEEGGGEEED NMEVSERQRE HPFIVTEPGE VARGKKNGLD YLFHLYEQCR EFLIQVQNIA  240
KERGEKCPTK VTNQVFRYAK KVGASYINKP KMRHYVHCYA LHCLDEEASN ALRRVFKERG  300
ENVGAWRQAC YKPLVATAAS QGWDIDAIFN AHPRLAIWYV PTKLRQLCHA ERNSAKASTS  360
AAVNHLPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156162RKKQRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-109LFY family protein