PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927729.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 244aa    MW: 27763.9 Da    PI: 6.2988
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927729.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.7e-111682081055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_022927729.1 168 RRRRERINERLKILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 208
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MAQLFNSTAP DPFMAALDLH NNYCNSMNFC LGELGNDNNG GFNLEEEDSN LQSCYEAELM  60
KLPEEEAAME QKRHTQLEIN CKKRSRGSRD VEKKWNERSK KTQKLTSSSN TEENGNAVHS  120
KQSTSNYCSE DESKASFELN NSRSNPKETT KTRASRGSAT DPQSLYARRR RERINERLKI  180
LQNLVPNGTK VDISTMLEEA VQYVKFLQLQ IKLLSSDDLW MYAPIAYNGM DIGLNRSPNT  240
SKEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-47bHLH family protein