PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022927730.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 203aa MW: 22311.7 Da PI: 8.5006

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022927730.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.8	0.00017	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ksFs+ L H ++H XP_022927730.1 53 YSCSLCNKSFSSYQALGGHKSSH 75 99************999999988 PP
2	zf-C2H2	11.8	0.00075	98	120	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k+F++ L H r+H XP_022927730.1 98 HQCSICFKCFPTGQALGGHKRRH 120 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MALQALNSPT EPWVKPSKRS TNPPLDSDDE HLAFSLLMLA HGGNIPSPTK LPYSCSLCNK 60 SFSSYQALGG HKSSHRKSDA AADTDSTTSA VSSSTRTHQC SICFKCFPTG QALGGHKRRH 120 YDGNNNKTLS AGSDSNGDST LTHTHVRDFD LNVPALPEFS PRFPDSHRRE KSQSQSQIRE 180 KYVEEEVQSP HPSKKPRLLL PVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	5e-41	C2H2 family protein