PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022927830.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 434aa MW: 48030.4 Da PI: 8.2816

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022927830.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.1e-12	368	413	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+el+P+ +k + +++L +AveYIk Lq XP_022927830.1 368 SIAERVRRTKISERMRKLQELVPNM----DKQTNTSDMLDLAVEYIKGLQ 413 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MEADFQQQQH ILHEHQQQQP QMSSGLTRYR SAPSSYFRRL TDREFCDQFF NRPSSPETEQ 60 IFAQFMTSGS AGDGGGGPVC SSQNLDESQK NAQAGDITTE ANQQTPYVNN ETRAIHQQPS 120 IVNSNFLPAS STPSSYHQNL MKPPLPNQNL IPEAEGSGSM GVDLKPQIRT DGGRSSNLIR 180 QSSSPAGLFD YINLNASGYA ALTGLGNSGT GSSFNEETFF SSPSRLKNFS PRALPPHSSG 240 LMSPMAGIEK KKIRETNQDT KGFAGSQTSD YGSTSFPVGS WDECAVMSDN IVSRKALEND 300 DDKEKYSNLN ISDTQKVDPR NRPPMLARHL TLPSTAAEMN AVEKILQFSD SVPCKLRAKR 360 GCATHPRSIA ERVRRTKISE RMRKLQELVP NMDKQTNTSD MLDLAVEYIK GLQKQVQTLT 420 DNRAKCKCSH RQHQ

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MEADFQQQQH ILHEHQQQQP QMSSGLTRYR SAPSSYFRRL TDREFCDQFF NRPSSPETEQ  60
IFAQFMTSGS AGDGGGGPVC SSQNLDESQK NAQAGDITTE ANQQTPYVNN ETRAIHQQPS  120
IVNSNFLPAS STPSSYHQNL MKPPLPNQNL IPEAEGSGSM GVDLKPQIRT DGGRSSNLIR  180
QSSSPAGLFD YINLNASGYA ALTGLGNSGT GSSFNEETFF SSPSRLKNFS PRALPPHSSG  240
LMSPMAGIEK KKIRETNQDT KGFAGSQTSD YGSTSFPVGS WDECAVMSDN IVSRKALEND  300
DDKEKYSNLN ISDTQKVDPR NRPPMLARHL TLPSTAAEMN AVEKILQFSD SVPCKLRAKR  360
GCATHPRSIA ERVRRTKISE RMRKLQELVP NMDKQTNTSD MLDLAVEYIK GLQKQVQTLT  420
DNRAKCKCSH RQHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	3e-60	bHLH family protein