PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927835.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 330aa    MW: 37018.3 Da    PI: 9.0986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927835.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383.1e-12160206455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h  +Er+RR+++ ++f  L  ++P +     kK++Ka++L  A++Y+k+Lq
  XP_022927835.1 160 DHILAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 206
                     5899***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MEISSMMGFS EMGMEDSGFV NQWHKSSIDE ISTLPLAAAF GQNLQHSYAH TNLDQKASSN  60
HSQNAIFGYA KHLSSYQTAN HSPNAHVVAY PTMSVSASNY TNQMDFTRPK EEVVCPQSIS  120
NIPSDMLISQ GSLCHQSHLT KSDRGAKRTA IKSRLPPAQD HILAERKRRE KLSQRFIALS  180
AIVPGLKKMD KASVLGDAIK YLKQLQEKVK ILEEQTRRKD IESVVFIKKS RVFGDGNNTS  240
KMEDEPLPEI EARSCDKNIL IRIHCVKNKD VIEKTIAEIE KLHLTIVNSS VMSFGSLALD  300
ITIIAQMDNE FRLSLKDLVK NLQSTLRSFQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165170ERKRRE
2166171RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-61bHLH family protein