PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927864.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 262aa    MW: 28618 Da    PI: 8.6594
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927864.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.52.6e-21115164255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+ k++g
  XP_022927864.1 115 NYRGVRQRP-WGKWAAEIRDPK----RaARVWLGTFNTAEEAARAYDEAAIKFRG 164
                     59*******.**********83....57*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MLMASHHHSA AFPRLTDEQE GLVIVDALTQ VVSGAAAAGL EFRHDHFLRL LHPPSTNTTT  60
TIFPPSSDFD TCHICRISGC LGCNFFSTPS SHQPTTTTTD KNNNSGRRVR RLKKNYRGVR  120
QRPWGKWAAE IRDPKRAARV WLGTFNTAEE AARAYDEAAI KFRGPRARLN FPSSDNSLMT  180
FNYSPPAAST TTSTSATVTA APATATAAAA TSNFNPNEAA VAPRTPSSMM EIQNNVVLAE  240
IFEDDDDIKS LIMDFAGQSR SR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-34ERF family protein