PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927910.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 321aa    MW: 34422.4 Da    PI: 5.0845
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927910.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.91e-16240275134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cg+++  Tp++Rrgp g++tLCnaCGl+++ kg
  XP_022927910.1 240 CTHCGVSSksTPMMRRGPAGPRTLCNACGLKWANKG 275
                     *******99***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MKWSGINRKN PQIQEMPDSN FQDVMYGSGV MNNVAQDLDN VQTQVGDEDD NVTGREESID  60
NPQMRFEDSG GMSGSVSAMN RVQDIVPSAY ISSSDYNPLI GNGGADQLTL SFRGEVYAFD  120
SVSPDKVQAV LLLLGGYEVP SGIPAVGSIP VNQQGADGFP VRSAQPQRAA SLSRFREKRK  180
ERCFGKKIRY NVRKEVALRM QRKKGQFISS KASADEVGSS SVLALTLDSG QDDGLLETSC  240
THCGVSSKST PMMRRGPAGP RTLCNACGLK WANKGILRDL SKVSTAGIQE PSVKETEQSD  300
GEANESDAAI NVDALASNGG K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.26e-75GATA family protein