PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927921.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 297aa    MW: 33083.7 Da    PI: 7.8833
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927921.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94.1e-171462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl
   XP_022927921.1 14 RGPWSPEEDAKLKHYIQKHGTGgNWISLPQKAGLKRCGKSCRLRWLNYL 62
                     89*********************************************97 PP
2Myb_DNA-binding422.2e-1369111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g ++++Ed +++++++  G++ W+ Ia  ++ gRt++++k++w++
   XP_022927921.1  69 GDFSEDEDRIIYHLFTTIGSR-WSVIATQLP-GRTDNDIKNYWNT 111
                      689******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MGRTPCCDKA NVKRGPWSPE EDAKLKHYIQ KHGTGGNWIS LPQKAGLKRC GKSCRLRWLN  60
YLRPDIKHGD FSEDEDRIIY HLFTTIGSRW SVIATQLPGR TDNDIKNYWN TKLKKKLIGT  120
NNVSSQNTTP HGLLSHFLQI SSTNSSSSSS SSPSSYSDHS NFPSFPNPNG TFSTLLDTIS  180
FSSTLLNPTN LISTNNNTSQ DQTFIVNPNQ VQNNYDVKSN HGLLVFGRDQ ASCSSSDAEY  240
GSGGGIGVED EKKRMSFVKQ FHDHEMWMEA SPLMDYGLEE IKQLITSSSC SNVFLDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.12e-74MYB family protein