PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022928080.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 299aa    MW: 34483.8 Da    PI: 9.8123
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022928080.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.44.1e-1628121299
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                     fkv   +++lk++ l +pkkf+ e+g+k  e+   +++  +g++Wev +  +k++gr+++  GW++Fv+  ++    f+vFk++ r s+f  +v 
  XP_022928080.1  28 FKVV-LAHALKEQKLEIPKKFVGEYGLKAFENNPTRVKVADGEEWEVGV--TKSDGRVWFDYGWQKFVEFYNVGLEYFLVFKYELRsSCF--HVV 117
                     5555.367888888***********9998888899999999********..*********************************666999..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f+ 
  XP_022928080.1 118 IFDP 121
                     9985 PP
2B360.52.8e-19201297498
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..E CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelv 93 
                     +  ps+  + + l +p++fae h    ee+ +++l+d++gr+W v++ +y   + ++r+ l++GW++F  +n+Lk+ D +vF+++++  ++  ++
  XP_022928080.1 201 KIYPSHIQSGAYLNVPRRFAEMHI---EEGAEMVLQDSDGRTWGVTYySYltPQMKRRVELRSGWRKFFVDNDLKVADCCVFEMIRKnsTTIAFK 292
                     56799999999*********9993...24669***************4448644455699***********************996623333445 PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v +fr
  XP_022928080.1 293 VDIFR 297
                     55555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MSKFLQQQLP AMASSSQPCK APDNPHFFKV VLAHALKEQK LEIPKKFVGE YGLKAFENNP  60
TRVKVADGEE WEVGVTKSDG RVWFDYGWQK FVEFYNVGLE YFLVFKYELR SSCFHVVIFD  120
PTATEIKYPL KKKLNMGTNF DDLHLISHPH PQVGKASFGA MKLMNNKRKL RSMTRTSERA  180
GAMAKATTFQ SMTPNPSFMC KIYPSHIQSG AYLNVPRRFA EMHIEEGAEM VLQDSDGRTW  240
GVTYYSYLTP QMKRRVELRS GWRKFFVDND LKVADCCVFE MIRKNSTTIA FKVDIFRAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-19B3 family protein