PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928189.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 551aa MW: 60624.1 Da PI: 7.1169

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928189.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.8	6.9e-17	251	300	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr l+P++ ++K +Ka+ L ++veYI+ Lq XP_022928189.1 251 RSKHSATEQRRRSKINDRFQMLRGLIPHS----DQKKDKASFLLEVVEYIQFLQ 300 889***********************9....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MELPQPRPFG AEGSKSTHDF LSLYTHSSPQ LDPRPSSQGG YLKTHDFLEP QERKRKASSK 60 KEINVERPPP PVPPTSVEHF LPGGIGTFSI SQVSYFDQRT LPKPEGSVFT GARSSSSGER 120 NDENSNGSGF TLWEECAVKK GKTGKENILG DRLHEPRAST SQWTASMERP SQSSSNNHHN 180 AFSCFSSSQP RGKKNPSFME MLKSAKSNSQ DEELDDDGDV VIKKEISTAN KGELRIKVDG 240 NISDQKANTP RSKHSATEQR RRSKINDRFQ MLRGLIPHSD QKKDKASFLL EVVEYIQFLQ 300 EKVQKYEGSY HEWNREIAKL MPLRNNQRSA DGFNDQSRGV DSGPGPALVF SANFVEKNAP 360 LSPLVPGSSH NAVDSDTSSA TTLKAVDHHP GRTNNVVPFP MSIPPKLYAP TRDGSVVPQA 420 SKPLSSDTDH PSSQSQILSY QARCYNNDDA VASELQKEQD LTIEGGTVNI SSVYSQGLLN 480 TLTHALQSSG VDLSQARISV QIELGELANR RSTASSSIVK DINIPINDME TIHTRVSAAE 540 DSERATIEKL V

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MELPQPRPFG AEGSKSTHDF LSLYTHSSPQ LDPRPSSQGG YLKTHDFLEP QERKRKASSK  60
KEINVERPPP PVPPTSVEHF LPGGIGTFSI SQVSYFDQRT LPKPEGSVFT GARSSSSGER  120
NDENSNGSGF TLWEECAVKK GKTGKENILG DRLHEPRAST SQWTASMERP SQSSSNNHHN  180
AFSCFSSSQP RGKKNPSFME MLKSAKSNSQ DEELDDDGDV VIKKEISTAN KGELRIKVDG  240
NISDQKANTP RSKHSATEQR RRSKINDRFQ MLRGLIPHSD QKKDKASFLL EVVEYIQFLQ  300
EKVQKYEGSY HEWNREIAKL MPLRNNQRSA DGFNDQSRGV DSGPGPALVF SANFVEKNAP  360
LSPLVPGSSH NAVDSDTSSA TTLKAVDHHP GRTNNVVPFP MSIPPKLYAP TRDGSVVPQA  420
SKPLSSDTDH PSSQSQILSY QARCYNNDDA VASELQKEQD LTIEGGTVNI SSVYSQGLLN  480
TLTHALQSSG VDLSQARISV QIELGELANR RSTASSSIVK DINIPINDME TIHTRVSAAE  540
DSERATIEKL V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-106	bHLH family protein